Improve v3 grid navigation and graph browsing

docs/atlas_search_graph_integration_plan_2026-03-05.md

@@ -258,6 +258,12 @@ Required linked item card data:
 4. `relation`
 5. `scope_path`
 6. `archived`
+
+Baseline now implemented in code:
+1. `SearchService.linked_neighbors(...)` returns deterministic incoming/outgoing neighbor cards
+2. `SearchService.relation_summary(...)` returns grouped incoming/outgoing/combined relation counts
+3. TUI v3 inspector now surfaces linked-item summaries and direct open-entry actions
+4. TUI v3 grid now exposes explicit sort/filter/mode controls and preserves the active search query across refreshes
 7. `modified_ts`
 
 Required actions:

docs/dev_control_center.md

@@ -1,6 +1,6 @@
 # SeedPass Dev Control Center
 
-Last updated: 2026-03-05  
+Last updated: 2026-03-06  
 Branch baseline: `beta`
 
 This is the single source-of-truth document to decide what to work on next.
@@ -97,9 +97,14 @@ Use these docs as inputs, but treat this file as the decision layer:
   - deterministic filter/sort pipeline added for keyword / hybrid / semantic search modes
   - v3 entry grid now routes through the unified search path instead of branching search logic in the widget layer
   - focused regression coverage added in `src/tests/test_core_api_services.py` and `src/tests/test_tui_v3_smoke.py`
+- Phase B baseline landed:
+  - `SearchService.linked_neighbors(...)` and `relation_summary(...)` now provide explicit outgoing/incoming graph navigation data
+  - v3 grid now preserves active search query across refresh/filter/sort changes
+  - v3 grid now exposes explicit in-app filter/mode/sort controls instead of palette-only command flow
+  - v3 inspector now includes a linked-items panel with direct open-entry actions
+  - focused regression coverage expanded in `src/tests/test_core_api_services.py` and `src/tests/test_tui_v3_smoke.py`
 - Next planned implementation:
-  - richer sort/filter controls in v3
-  - linked-item navigation service methods and inspector consumers
+  - deeper linked-navigation workflows and richer graph-oriented pivots
   - deeper atlas/search handoff and graph-aware result workflows
 
 ### Future Capability: Nostr Communications
@@ -174,7 +179,7 @@ Use these docs as inputs, but treat this file as the decision layer:
 3. Continue v3 startup/restore hardening:
 : clearer restore warnings, success summaries, and import/recovery guidance.
 4. Continue Phase B/C from `docs/atlas_search_graph_integration_plan_2026-03-05.md`:
-: linked-item navigation, richer filter/sort controls, and deeper v3 search/navigation handoff.
+: deeper v3 search/navigation handoff, graph pivots, and next-level linked-item workflows.
 5. Resume Index0 Atlas and graph follow-on work after current v3 UX slices stabilize:
 : agent-facing atlas workflows, linked-item navigation, deeper search/navigation handoff, and any later event-pruning compaction policy.
 6. Continue security-readiness blockers in parallel where they do not conflict with the v3 path.
@@ -184,9 +189,9 @@ Use these docs as inputs, but treat this file as the decision layer:
 ### Slice A: “Search Graph Navigation”
 
 Deliverables:
-- Add linked-neighbor and relation-summary methods above the current atlas/search foundations.
-- Expose explicit sort and filter controls in v3 on top of the existing unified `SearchService`.
-- Add inspector linked-item navigation so users can browse outgoing/incoming relationships without raw JSON inspection.
+- Extend the new linked-neighbor and relation-summary methods with deeper graph pivots above the current atlas/search foundations.
+- Continue iterating on the new explicit v3 sort/filter controls on top of the unified `SearchService`.
+- Expand the new inspector linked-item navigation so users can pivot through relationships more fluidly without raw JSON inspection.
 - Keep the atlas/search/graph plan and control center synchronized with shipped behavior as this slice lands.
 
 Exit criteria:

docs/tui_v3_plan.md

@@ -1,6 +1,6 @@
 # TUI v3 Modular Architecture & Parity Plan
 
-Last updated: 2026-03-05  
+Last updated: 2026-03-06  
 Branch target: `beta`  
 Status: Active (Default UI / parity hardening in progress)
 Companion search/atlas plan: `docs/atlas_search_graph_integration_plan_2026-03-05.md`
@@ -168,3 +168,22 @@ To finalize v3, we must verify 100% functional parity with the **Legacy TUI**.
 - All reveal/QR/copy semantics verified for high-risk kinds.
 - PGP Public key support confirmed in both TUI v2 and v3.
 - Nostr relay actions mapped back through internal configuration via `app.services['nostr']`.
+
+## 6. Progress Log (2026-03-06)
+
+### Completed in this session
+- **Main grid reliability:**
+  - fixed v3 main-grid keyboard navigation by restoring focus ownership to `#entry-data-table` on workspace mount
+  - closing the command palette now restores focus to the main grid instead of leaving focus on a hidden input
+  - added focused regression coverage for default grid focus and post-palette keyboard navigation
+- **Search graph navigation baseline:**
+  - added `SearchService.linked_neighbors(...)` for deterministic incoming/outgoing link traversal
+  - added `SearchService.relation_summary(...)` for grouped relation counts
+  - v3 inspector now includes a linked-items panel with direct open-entry actions
+- **Grid control hardening:**
+  - v3 grid now persists the active search query across refresh/filter/sort changes
+  - added explicit in-app filter, search-mode, archived, and sort controls on the main grid surface
+  - palette command surface now includes `sort <...>` and routes search-mode changes through app actions for one consistent control path
+
+### Validation evidence
+- `pytest -q src/tests/test_tui_v3_smoke.py src/tests/test_tui_v3_parity.py src/tests/test_core_api_services.py` -> `107 passed`

memory-update.md

@@ -46,3 +46,19 @@
 - Added regression tests in `src/tests/test_tui_v3_parity.py` to lock this compatibility behavior.
 - Current CI-equivalent state:
   - Full main suite passes (`1064 passed, 16 skipped`), but existing `tui2_coverage_gate.sh` still fails `src/seedpass/core/api.py >= 85` on its focused subset (`68.79%`) and needs separate gate policy/workload adjustment.
+
+## Session addendum — v3 grid focus + graph navigation baseline (2026-03-06)
+- Root cause for the reported v3 "main index list / scrolling" bug was focus management, not `DataTable` scrolling itself:
+  - first render focus landed on the hidden command palette input
+  - arrow-key navigation did nothing until the entry table was manually focused
+- Stable fix:
+  - `MainScreen.on_mount()` now focuses `#entry-data-table`
+  - closing the command palette restores focus to `#entry-data-table` instead of clearing focus
+- Reusable v3 search/navigation pattern:
+  - persist the active search query in app state so refresh/filter/sort changes do not silently clear the current result set
+  - keep sort and mode changes as explicit app actions (`action_set_search_mode`, `action_set_search_sort`) so toolbar buttons and palette commands stay aligned
+- Search/graph baseline shipped:
+  - `SearchService.linked_neighbors(...)` now returns deterministic incoming/outgoing link cards
+  - `SearchService.relation_summary(...)` now returns grouped relation counts
+  - TUI v3 inspector now exposes a linked-items panel with direct open-entry actions
+  - TUI v3 grid now has explicit filter/mode/sort buttons instead of palette-only control

src/seedpass/core/api.py

@@ -1501,6 +1501,135 @@ class SearchService:
             results.sort(key=_result_key)
             return results[: max(1, int(limit))]
 
+    def linked_neighbors(
+        self,
+        entry_id: int,
+        *,
+        relation: str | None = None,
+        direction: str = "both",
+        include_archived: bool = True,
+        limit: int = 50,
+    ) -> list[dict[str, Any]]:
+        with self._lock:
+            target_entry_id = int(entry_id or 0)
+            if target_entry_id <= 0:
+                return []
+
+            direction_key = str(direction or "both").strip().lower()
+            if direction_key not in {"incoming", "outgoing", "both"}:
+                direction_key = "both"
+            relation_filter = str(relation or "").strip().lower()
+            scope_path = self._scope_path()
+
+            entries = self._all_entries()
+            entry_map = {
+                int(item.get("id", 0) or 0): item
+                for item in entries
+                if int(item.get("id", 0) or 0) > 0
+            }
+            current_entry = entry_map.get(target_entry_id)
+            if current_entry is None:
+                return []
+
+            neighbors: list[dict[str, Any]] = []
+
+            if direction_key in {"outgoing", "both"}:
+                for link in self._normalized_links(current_entry):
+                    link_relation = str(link.get("relation", "")).strip().lower()
+                    if relation_filter and link_relation != relation_filter:
+                        continue
+                    neighbor_id = int(link.get("target_id", 0) or 0)
+                    neighbor = entry_map.get(neighbor_id)
+                    if neighbor is None:
+                        continue
+                    archived = bool(neighbor.get("archived", False))
+                    if not include_archived and archived:
+                        continue
+                    kind = self._entry_kind(neighbor)
+                    neighbors.append(
+                        {
+                            "entry_id": neighbor_id,
+                            "label": str(neighbor.get("label", "")).strip(),
+                            "kind": kind,
+                            "scope_path": scope_path,
+                            "archived": archived,
+                            "direction": "outgoing",
+                            "relation": link_relation,
+                            "note": str(link.get("note", "")).strip(),
+                            "tags": self._normalized_tags(neighbor),
+                            "meta": self._meta(neighbor, kind),
+                        }
+                    )
+
+            if direction_key in {"incoming", "both"}:
+                for source in entries:
+                    source_id = int(source.get("id", 0) or 0)
+                    if source_id <= 0 or source_id == target_entry_id:
+                        continue
+                    archived = bool(source.get("archived", False))
+                    if not include_archived and archived:
+                        continue
+                    for link in self._normalized_links(source):
+                        if int(link.get("target_id", 0) or 0) != target_entry_id:
+                            continue
+                        link_relation = str(link.get("relation", "")).strip().lower()
+                        if relation_filter and link_relation != relation_filter:
+                            continue
+                        kind = self._entry_kind(source)
+                        neighbors.append(
+                            {
+                                "entry_id": source_id,
+                                "label": str(source.get("label", "")).strip(),
+                                "kind": kind,
+                                "scope_path": scope_path,
+                                "archived": archived,
+                                "direction": "incoming",
+                                "relation": link_relation,
+                                "note": str(link.get("note", "")).strip(),
+                                "tags": self._normalized_tags(source),
+                                "meta": self._meta(source, kind),
+                            }
+                        )
+
+            neighbors.sort(
+                key=lambda item: (
+                    str(item.get("direction", "")),
+                    str(item.get("relation", "")),
+                    str(item.get("label", "")).lower(),
+                    int(item.get("entry_id", 0) or 0),
+                )
+            )
+            return neighbors[: max(1, int(limit))]
+
+    def relation_summary(
+        self,
+        entry_id: int,
+        *,
+        include_archived: bool = True,
+    ) -> dict[str, dict[str, int]]:
+        neighbors = self.linked_neighbors(
+            entry_id,
+            include_archived=include_archived,
+            direction="both",
+            limit=1000,
+        )
+        summary = {
+            "incoming": {},
+            "outgoing": {},
+            "combined": {},
+        }
+        for item in neighbors:
+            relation = str(item.get("relation", "")).strip().lower()
+            direction = str(item.get("direction", "")).strip().lower()
+            if not relation or direction not in {"incoming", "outgoing"}:
+                continue
+            summary[direction][relation] = summary[direction].get(relation, 0) + 1
+            summary["combined"][relation] = summary["combined"].get(relation, 0) + 1
+        return {
+            key: dict(sorted(value.items()))
+            for key, value in summary.items()
+        }
+
 
 class AtlasService:
     """Thread-safe wrapper around canonical atlas/index0 read operations."""

src/seedpass/tui_v3/app.py

@@ -14,7 +14,7 @@ from utils.fingerprint_manager import FingerprintManager
 from .widgets.header import AtlasStrip, RibbonHeader
 from .widgets.sidebar import SidebarContainer
 from .widgets.grid import GridContainer
-from .widgets.inspector import BoardContainer
+from .widgets.inspector import BoardContainer, LinkedItemsPanel
 from .widgets.palette import CommandPalette
 from .widgets.action_bar import ActionBar
 from .screens.atlas import AtlasWayfinderScreen
@@ -63,7 +63,7 @@ class CommandProcessor:
 
         if cmd == "help":
             self.app.notify(
-                "v3 commands: help, stats, atlas, wayfinder, session-status, lock, unlock <password>, refresh, search <query>, search-mode <keyword|hybrid|semantic>, filter <all|secrets|docs|keys|2fa>, archived, open <id>, settings, profiles, relay-list, npub, nostr-pubkey, nostr-reset-sync-state, nostr-fresh-namespace, change-password, backup-parent-seed <path> (optional: password), maximize, copy, edit, export, add, seed-plus, archive, restore, delete, ml, mx, db-export <path>, db-import <path>"
+                "v3 commands: help, stats, atlas, wayfinder, session-status, lock, unlock <password>, refresh, search <query>, search-mode <keyword|hybrid|semantic>, sort <relevance|modified_desc|modified_asc|label_asc|kind|created_desc|most_linked>, filter <all|secrets|docs|keys|2fa>, archived, open <id>, settings, profiles, relay-list, npub, nostr-pubkey, nostr-reset-sync-state, nostr-fresh-namespace, change-password, backup-parent-seed <path> (optional: password), maximize, copy, edit, export, add, seed-plus, archive, restore, delete, ml, mx, db-export <path>, db-import <path>"
             )
         elif cmd == "stats":
             self.app.notify("Calculating stats...")
@@ -93,12 +93,15 @@ class CommandProcessor:
                     "Usage: search-mode <keyword|hybrid|semantic>", severity="warning"
                 )
                 return
-            mode = args[0].lower()
-            if mode in {"keyword", "hybrid", "semantic"}:
-                self.app.search_mode = mode
-                self.app.notify(f"Search mode set to: {mode}")
-            else:
-                self.app.notify(f"Invalid search mode: {mode}", severity="error")
+            self.app.action_set_search_mode(args[0])
+        elif cmd == "sort":
+            if not args:
+                self.app.notify(
+                    "Usage: sort <relevance|modified_desc|modified_asc|label_asc|kind|created_desc|most_linked>",
+                    severity="warning",
+                )
+                return
+            self.app.action_set_search_sort(args[0])
         elif cmd == "filter":
             if not args:
                 self.app.notify(
@@ -211,8 +214,16 @@ class MainScreen(Screen):
                         yield Static("Inspector Board", id="inspector-heading")
                         yield Button("Close", id="inspector-close", variant="default")
                     yield BoardContainer(id="board-container")
+                    yield LinkedItemsPanel(id="linked-items-panel")
         yield ActionBar(id="action-bar")
 
+    def on_mount(self) -> None:
+        """Keep keyboard navigation on the main entry grid by default."""
+        try:
+            self.query_one("#entry-data-table").focus()
+        except Exception:
+            pass
+
 
 class StartupScreen(Screen):
     """Profile-selection and unlock screen for TUI v3 startup."""
@@ -821,7 +832,9 @@ class SeedPassTuiV3(App[None]):
     active_breadcrumb = reactive("")
     selected_entry_id = reactive[int | None](None)
     session_locked = reactive(False)
+    search_query = reactive("")
     search_mode = reactive("keyword")
+    search_sort = reactive("relevance")
     filter_kind = reactive("all")
     show_archived = reactive(False)
 
@@ -1104,6 +1117,7 @@ class SeedPassTuiV3(App[None]):
             else:
                 inspector.remove_class("hidden")
             self.screen.query_one("#board-container").update_entry(new_id)
+            self.screen.query_one("#linked-items-panel").update_entry(new_id)
         except Exception:
             pass
 
@@ -1131,11 +1145,41 @@ class SeedPassTuiV3(App[None]):
     def action_search(self, query: str) -> None:
         """Search entries and update grid."""
         try:
-            self.screen.query_one("#entry-data-table")._refresh_data(query)
+            self.search_query = str(query or "")
+            self.screen.query_one("#entry-data-table")._refresh_data()
             self.notify(f"Search results for: {query}")
         except Exception:
             pass
 
+    def action_set_search_mode(self, mode: str) -> None:
+        """Set the active search mode and refresh the grid."""
+        normalized = str(mode or "").strip().lower()
+        if normalized not in {"keyword", "hybrid", "semantic"}:
+            self.notify(f"Invalid search mode: {mode}", severity="error")
+            return
+        self.search_mode = normalized
+        self.notify(f"Search mode set to: {normalized}")
+        self.action_refresh()
+
+    def action_set_search_sort(self, sort_key: str) -> None:
+        """Set the active grid sort mode and refresh the grid."""
+        normalized = str(sort_key or "").strip().lower()
+        allowed = {
+            "relevance",
+            "modified_desc",
+            "modified_asc",
+            "label_asc",
+            "kind",
+            "created_desc",
+            "most_linked",
+        }
+        if normalized not in allowed:
+            self.notify(f"Invalid sort mode: {sort_key}", severity="error")
+            return
+        self.search_sort = normalized
+        self.notify(f"Grid sort set to: {normalized}")
+        self.action_refresh()
+
     def action_toggle_archived_view(self) -> None:
         """Toggle between active entries and archived entries."""
         self.show_archived = not self.show_archived

src/seedpass/tui_v3/widgets/grid.py

@@ -2,7 +2,8 @@ from __future__ import annotations
 from typing import Any
 from types import SimpleNamespace
 from textual.app import ComposeResult
-from textual.widgets import Static, DataTable
+from textual.widgets import Static, DataTable, Button
+from textual.containers import Horizontal
 from textual.reactive import reactive
 
 
@@ -23,7 +24,6 @@ class GridMetrics(Static):
 
     def render(self) -> str:
         app = self.app
-        # These would eventually come from App reactives
         pg = "1/1"
         rows = "0/0"
         try:
@@ -36,7 +36,6 @@ class GridMetrics(Static):
             pass
 
         density = "compact"
-        # Search mode highlighting
         m = app.search_mode
         keyword = f"[b](KEYWORD)[/b]" if m == "keyword" else "keyword"
         hybrid = f"[b](HYBRID)[/b]" if m == "hybrid" else "hybrid"
@@ -44,15 +43,72 @@ class GridMetrics(Static):
 
         search = f"{keyword} {hybrid} {semantic}"
         filter_text = f"Filter: [b]{app.filter_kind}[/b]"
+        sort_text = f"Sort: [b]{app.search_sort}[/b]"
+        query_text = (
+            f' Query: [b]"{app.search_query}"[/b]' if str(app.search_query).strip() else ""
+        )
         arch_text = " | [reverse] ARCHIVED [/reverse]" if app.show_archived else ""
 
-        return f"Entry Grid  |  Pg {pg}  Rows {rows}  Density {density}  {filter_text}{arch_text}  Search {search}"
+        return (
+            f"Entry Grid  |  Pg {pg}  Rows {rows}  Density {density}  "
+            f"{filter_text}  {sort_text}{arch_text}{query_text}  Search {search}"
+        )
 
     def on_mount(self) -> None:
         self.watch(self.app, "search_mode", self.refresh)
         self.watch(self.app, "selected_entry_id", self.refresh)
         self.watch(self.app, "filter_kind", self.refresh)
         self.watch(self.app, "show_archived", self.refresh)
+        self.watch(self.app, "search_sort", self.refresh)
+        self.watch(self.app, "search_query", self.refresh)
+
+
+class GridToolbar(Horizontal):
+    """Explicit filter/sort/search-mode controls for the main grid."""
+
+    DEFAULT_CSS = """
+    GridToolbar {
+        height: 3;
+        background: #d9d9d9;
+        color: #000000;
+        padding: 0 1;
+    }
+    GridToolbar Button {
+        min-width: 8;
+        width: auto;
+        margin-right: 1;
+        height: 1;
+    }
+    """
+
+    def compose(self) -> ComposeResult:
+        yield Button("All", id="grid-filter-all")
+        yield Button("Secrets", id="grid-filter-secrets")
+        yield Button("Docs", id="grid-filter-docs")
+        yield Button("Keys", id="grid-filter-keys")
+        yield Button("2FA", id="grid-filter-2fa")
+        yield Button("Archived", id="grid-toggle-archived")
+        yield Button("Keyword", id="grid-mode-keyword")
+        yield Button("Hybrid", id="grid-mode-hybrid")
+        yield Button("Semantic", id="grid-mode-semantic")
+        yield Button("Relevance", id="grid-sort-relevance")
+        yield Button("Recent", id="grid-sort-modified_desc")
+        yield Button("Label", id="grid-sort-label_asc")
+        yield Button("Linked", id="grid-sort-most_linked")
+
+    def on_button_pressed(self, event: Button.Pressed) -> None:
+        button_id = event.button.id or ""
+        if button_id.startswith("grid-filter-"):
+            self.app.action_set_kind_filter(button_id.removeprefix("grid-filter-"))
+            return
+        if button_id == "grid-toggle-archived":
+            self.app.action_toggle_archived_view()
+            return
+        if button_id.startswith("grid-mode-"):
+            self.app.action_set_search_mode(button_id.removeprefix("grid-mode-"))
+            return
+        if button_id.startswith("grid-sort-"):
+            self.app.action_set_search_sort(button_id.removeprefix("grid-sort-"))
 
 
 class EntryDataTable(DataTable):
@@ -76,11 +132,12 @@ class EntryDataTable(DataTable):
         except Exception:
             pass
 
-    def _refresh_data(self, query: str = "") -> None:
+    def _refresh_data(self, query: str | None = None) -> None:
         self.clear()
         app = self.app
         if "entry" not in app.services:
             return
+        active_query = app.search_query if query is None else query
         if app.selected_entry_id is None:
             self._suppress_next_highlight = True
 
@@ -105,11 +162,12 @@ class EntryDataTable(DataTable):
         if "search" in app.services:
             try:
                 results = app.services["search"].search(
-                    query,
+                    active_query,
                     kinds=kinds,
                     include_archived=app.show_archived,
                     archived_only=app.show_archived,
                     mode=app.search_mode,
+                    sort=app.search_sort,
                 )
                 for result in results:
                     try:
@@ -131,9 +189,9 @@ class EntryDataTable(DataTable):
                 app.notify(f"Search failed: {e}", severity="error")
                 entries = []
         # Fallback to direct semantic search if requested and available
-        elif app.search_mode != "keyword" and "semantic" in app.services and query:
+        elif app.search_mode != "keyword" and "semantic" in app.services and active_query:
             try:
-                results = app.services["semantic"].search(query, mode=app.search_mode)
+                results = app.services["semantic"].search(active_query, mode=app.search_mode)
                 # results is list of {entry_id, kind, label, score, excerpt}
                 for r in results:
                     eid = r["entry_id"]
@@ -173,7 +231,7 @@ class EntryDataTable(DataTable):
                 app.notify(f"Semantic search failed: {e}", severity="error")
                 # Fallback to lexical
                 entries = app.services["entry"].search_entries(
-                    query,
+                    active_query,
                     kinds=kinds,
                     include_archived=app.show_archived,
                     archived_only=app.show_archived,
@@ -181,7 +239,7 @@ class EntryDataTable(DataTable):
         else:
             # Fetch filtered data from standard service
             entries = app.services["entry"].search_entries(
-                query,
+                active_query,
                 kinds=kinds,
                 include_archived=app.show_archived,
                 archived_only=app.show_archived,
@@ -236,6 +294,7 @@ class GridContainer(Static):
 
     def compose(self) -> ComposeResult:
         yield GridMetrics()
+        yield GridToolbar()
         # Header divider
         yield Static("-" * 120, id="grid-divider")
         yield EntryDataTable(id="entry-data-table")

src/seedpass/tui_v3/widgets/inspector.py

@@ -1,7 +1,7 @@
 from __future__ import annotations
 from typing import Any
 from textual.app import ComposeResult
-from textual.widgets import Static, Label
+from textual.widgets import Static, Label, Button
 from textual.containers import Vertical, Horizontal
 from textual.reactive import reactive
 
@@ -631,3 +631,115 @@ class BoardContainer(Vertical):
         new_board = board_cls()
         self.mount(new_board)
         return new_board
+
+
+class LinkedItemsPanel(Vertical):
+    """Inspector panel for browsing explicit incoming and outgoing relationships."""
+
+    DEFAULT_CSS = """
+    LinkedItemsPanel {
+        height: auto;
+        max-height: 12;
+        min-height: 6;
+        background: #111111;
+        color: #ffffff;
+        border-top: solid #ffffff;
+        padding: 1;
+    }
+    #linked-items-title {
+        text-style: bold;
+        margin-bottom: 1;
+    }
+    .linked-summary {
+        color: #cccccc;
+        margin-bottom: 1;
+    }
+    .linked-empty {
+        color: #aaaaaa;
+    }
+    .linked-open {
+        width: 100%;
+        height: auto;
+        margin-bottom: 1;
+        content-align: left middle;
+    }
+    """
+
+    def compose(self) -> ComposeResult:
+        yield Label("Linked Items", id="linked-items-title")
+        yield Label("No linked items.", id="linked-items-summary", classes="linked-summary")
+        with Vertical(id="linked-items-list"):
+            yield Label("Select an entry to inspect relationships.", classes="linked-empty")
+
+    def update_entry(self, entry_id: int | None) -> None:
+        summary_label = self.query_one("#linked-items-summary", Label)
+        list_container = self.query_one("#linked-items-list", Vertical)
+        list_container.remove_children()
+
+        if entry_id is None:
+            summary_label.update("No linked items.")
+            list_container.mount(
+                Label(
+                    "Select an entry to inspect relationships.",
+                    classes="linked-empty",
+                )
+            )
+            return
+
+        search = self.app.services.get("search")
+        if search is None or not hasattr(search, "linked_neighbors"):
+            summary_label.update("Search graph service unavailable.")
+            list_container.mount(
+                Label(
+                    "Linked navigation requires SearchService graph helpers.",
+                    classes="linked-empty",
+                )
+            )
+            return
+
+        try:
+            neighbors = search.linked_neighbors(entry_id, direction="both", limit=8)
+            summary = search.relation_summary(entry_id)
+        except Exception as exc:
+            summary_label.update(f"Linked navigation failed: {exc}")
+            list_container.mount(Label("Unable to load linked items.", classes="linked-empty"))
+            return
+
+        outgoing = ", ".join(
+            f"{relation}:{count}" for relation, count in summary.get("outgoing", {}).items()
+        ) or "none"
+        incoming = ", ".join(
+            f"{relation}:{count}" for relation, count in summary.get("incoming", {}).items()
+        ) or "none"
+        summary_label.update(f"Outgoing {outgoing}  |  Incoming {incoming}")
+
+        if not neighbors:
+            list_container.mount(Label("No linked items for this entry.", classes="linked-empty"))
+            return
+
+        for item in neighbors:
+            direction = "->" if item.get("direction") == "outgoing" else "<-"
+            relation = str(item.get("relation", "")).strip() or "related_to"
+            label = str(item.get("label", "")).strip() or f"Entry #{item.get('entry_id', '?')}"
+            kind = str(item.get("kind", "")).strip() or "entry"
+            archived = " archived" if item.get("archived") else ""
+            line = f"{direction} {relation}  #{item.get('entry_id')}  {label} [{kind}{archived}]"
+            list_container.mount(
+                Button(
+                    f"{line}  |  Open",
+                    id=f"linked-open-{int(item.get('entry_id', 0) or 0)}",
+                    classes="linked-open",
+                )
+            )
+
+    def on_button_pressed(self, event: Button.Pressed) -> None:
+        button_id = event.button.id or ""
+        if not button_id.startswith("linked-open-"):
+            return
+        try:
+            entry_id = int(button_id.removeprefix("linked-open-"))
+        except ValueError:
+            self.app.notify("Invalid linked item target", severity="error")
+            return
+        self.app.selected_entry_id = entry_id
+        self.app.notify(f"Opened linked entry #{entry_id}")

src/seedpass/tui_v3/widgets/palette.py

@@ -51,7 +51,10 @@ class CommandPalette(Vertical):
     def toggle(self) -> None:
         if self.has_class("visible"):
             self.remove_class("visible")
-            self.app.set_focus(None)
+            try:
+                self.app.screen.query_one("#entry-data-table").focus()
+            except Exception:
+                self.app.set_focus(None)
         else:
             self.add_class("visible")
             self.input.focus()

src/tests/test_core_api_services.py

@@ -391,6 +391,73 @@ class TestSearchService:
         assert results[0]["linked_hits"][0]["relation"] == "references"
         assert results[0]["excerpt"].startswith("SeedPass atlas")
 
+    def test_linked_neighbors_and_relation_summary(
+        self, service, mock_manager, tmp_path
+    ):
+        mock_manager.fingerprint_dir = tmp_path
+        mock_manager.entry_manager.search_entries.return_value = [
+            (1, "Project Plan", None, None, False, EntryType.DOCUMENT),
+            (2, "Ops Vault", "ops", "https://ops", False, EntryType.PASSWORD),
+            (3, "Runbook", None, None, False, EntryType.DOCUMENT),
+        ]
+        entries = {
+            1: {
+                "id": 1,
+                "kind": "document",
+                "label": "Project Plan",
+                "links": [{"target_id": 2, "relation": "references"}],
+            },
+            2: {
+                "id": 2,
+                "kind": "password",
+                "label": "Ops Vault",
+                "username": "ops",
+                "url": "https://ops",
+            },
+            3: {
+                "id": 3,
+                "kind": "document",
+                "label": "Runbook",
+                "links": [{"target_id": 1, "relation": "depends_on"}],
+            },
+        }
+        mock_manager.entry_manager.retrieve_entry.side_effect = lambda eid: entries[eid]
+
+        neighbors = service.linked_neighbors(1)
+        summary = service.relation_summary(1)
+
+        assert neighbors == [
+            {
+                "entry_id": 3,
+                "label": "Runbook",
+                "kind": "document",
+                "scope_path": f"seed/{tmp_path.name}",
+                "archived": False,
+                "direction": "incoming",
+                "relation": "depends_on",
+                "note": "",
+                "tags": [],
+                "meta": "",
+            },
+            {
+                "entry_id": 2,
+                "label": "Ops Vault",
+                "kind": "password",
+                "scope_path": f"seed/{tmp_path.name}",
+                "archived": False,
+                "direction": "outgoing",
+                "relation": "references",
+                "note": "",
+                "tags": [],
+                "meta": "ops",
+            },
+        ]
+        assert summary == {
+            "incoming": {"depends_on": 1},
+            "outgoing": {"references": 1},
+            "combined": {"depends_on": 1, "references": 1},
+        }
+
     @patch("seedpass.core.api.SemanticIndexService.search")
     def test_hybrid_search_combines_semantic_and_filters(
         self, semantic_search, service, mock_manager, tmp_path

src/tests/test_tui_v3_smoke.py

@@ -27,9 +27,24 @@ from seedpass.tui_v3.screens.security import ChangePasswordScreen
 class V3EntryService:
     def __init__(self) -> None:
         self._entries: dict[int, dict] = {
-            1: {"id": 1, "kind": "password", "label": "Email", "length": 16},
-            2: {"id": 2, "kind": "managed_account", "label": "Managed Ops"},
-            3: {"id": 3, "kind": "nostr", "label": "Agent Nostr"},
+            1: {
+                "id": 1,
+                "kind": "password",
+                "label": "Email",
+                "length": 16,
+                "links": [{"target_id": 2, "relation": "references"}],
+            },
+            2: {
+                "id": 2,
+                "kind": "managed_account",
+                "label": "Managed Ops",
+            },
+            3: {
+                "id": 3,
+                "kind": "nostr",
+                "label": "Agent Nostr",
+                "links": [{"target_id": 1, "relation": "uses"}],
+            },
         }
         self.copied: list[str] = []
 
@@ -199,6 +214,7 @@ class V3SearchService:
     def __init__(self, entry: V3EntryService) -> None:
         self.entry = entry
         self.calls: list[dict] = []
+        self.link_calls: list[dict] = []
 
     def search(
         self,
@@ -259,6 +275,62 @@ class V3SearchService:
             )
         return out
 
+    def linked_neighbors(
+        self,
+        entry_id: int,
+        *,
+        relation: str | None = None,
+        direction: str = "both",
+        include_archived: bool = True,
+        limit: int = 50,
+    ) -> list[dict]:
+        _ = (include_archived, limit)
+        self.link_calls.append(
+            {
+                "entry_id": entry_id,
+                "relation": relation,
+                "direction": direction,
+            }
+        )
+        if int(entry_id) == 1:
+            rows = [
+                {
+                    "entry_id": 2,
+                    "label": "Managed Ops",
+                    "kind": "managed_account",
+                    "archived": False,
+                    "direction": "outgoing",
+                    "relation": "references",
+                },
+                {
+                    "entry_id": 3,
+                    "label": "Agent Nostr",
+                    "kind": "nostr",
+                    "archived": False,
+                    "direction": "incoming",
+                    "relation": "uses",
+                },
+            ]
+            if relation:
+                return [row for row in rows if row["relation"] == relation]
+            return rows
+        return []
+
+    def relation_summary(
+        self,
+        entry_id: int,
+        *,
+        include_archived: bool = True,
+    ) -> dict[str, dict[str, int]]:
+        _ = include_archived
+        if int(entry_id) != 1:
+            return {"incoming": {}, "outgoing": {}, "combined": {}}
+        return {
+            "incoming": {"uses": 1},
+            "outgoing": {"references": 1},
+            "combined": {"references": 1, "uses": 1},
+        }
+
 
 def _build_app() -> tuple[object, V3EntryService, V3VaultService, V3SearchService]:
     holder: dict[str, object] = {}
@@ -360,6 +432,98 @@ async def test_tui3_grid_uses_search_service_for_query_and_mode() -> None:
         assert table.row_count >= 1
 
 
+@pytest.mark.anyio
+async def test_tui3_main_grid_has_default_focus_and_keyboard_navigation() -> None:
+    app, _entry, _vault, _search = _build_app()
+    async with app.run_test() as pilot:
+        await pilot.pause()
+        table = app.screen.query_one("#entry-data-table", DataTable)
+        assert app.focused is table
+        assert app.selected_entry_id is None
+
+        await pilot.press("down")
+        await pilot.pause()
+
+        assert app.focused is table
+        assert app.selected_entry_id == 2
+        assert table.cursor_coordinate.row == 1
+
+
+@pytest.mark.anyio
+async def test_tui3_palette_close_restores_focus_to_main_grid() -> None:
+    app, _entry, _vault, _search = _build_app()
+    async with app.run_test() as pilot:
+        await pilot.pause()
+        table = app.screen.query_one("#entry-data-table", DataTable)
+        palette_input = app.screen.query_one("#palette-input", Input)
+
+        app.action_open_palette()
+        await pilot.pause()
+        assert app.focused is palette_input
+
+        app.action_open_palette()
+        await pilot.pause()
+        assert app.focused is table
+
+        await pilot.press("down")
+        await pilot.pause()
+        assert app.selected_entry_id == 2
+
+
+@pytest.mark.anyio
+async def test_tui3_grid_toolbar_updates_filter_mode_and_sort() -> None:
+    app, _entry, _vault, search = _build_app()
+    async with app.run_test() as pilot:
+        await pilot.pause()
+        app.screen.query_one("#grid-filter-keys", Button).press()
+        await pilot.pause()
+        assert app.filter_kind == "keys"
+
+        app.screen.query_one("#grid-mode-hybrid", Button).press()
+        await pilot.pause()
+        assert app.search_mode == "hybrid"
+
+        app.screen.query_one("#grid-sort-most_linked", Button).press()
+        await pilot.pause()
+        assert app.search_sort == "most_linked"
+        assert search.calls
+        assert search.calls[-1]["sort"] == "most_linked"
+
+
+@pytest.mark.anyio
+async def test_tui3_search_query_persists_across_refresh() -> None:
+    app, _entry, _vault, search = _build_app()
+    async with app.run_test() as pilot:
+        await pilot.pause()
+        app.action_search("Email")
+        await pilot.pause()
+        assert app.search_query == "Email"
+        assert search.calls[-1]["query"] == "Email"
+
+        app.action_set_kind_filter("all")
+        await pilot.pause()
+        assert search.calls[-1]["query"] == "Email"
+
+
+@pytest.mark.anyio
+async def test_tui3_linked_items_panel_shows_neighbors_and_opens_entry() -> None:
+    app, _entry, _vault, search = _build_app()
+    async with app.run_test() as pilot:
+        await pilot.pause()
+        app.selected_entry_id = 1
+        await pilot.pause()
+
+        summary = app.screen.query_one("#linked-items-summary", Static)
+        assert "Outgoing references:1" in str(summary.render())
+        assert "Incoming uses:1" in str(summary.render())
+        assert search.link_calls[-1]["entry_id"] == 1
+
+        open_button = app.screen.query_one("#linked-open-2", Button)
+        open_button.press()
+        await pilot.pause()
+        assert app.selected_entry_id == 2
+
+
 @pytest.mark.anyio
 async def test_tui3_inspector_stays_collapsed_until_selection_and_can_close() -> None:
     app, _entry, _vault, _search = _build_app()